1 00:00:12,049 --> 00:00:09,259 good afternoon everyone my name is khan 2 00:00:14,660 --> 00:00:12,059 Sindhu I'm a PhD student from the 3 00:00:18,040 --> 00:00:14,670 University of Southern California so 4 00:00:21,859 --> 00:00:18,050 today I'm going to introduce my research 5 00:00:25,939 --> 00:00:21,869 special microbial community hydrothermal 6 00:00:29,179 --> 00:00:25,949 system I think in previous talk they 7 00:00:32,179 --> 00:00:29,189 already talked about a lot early life an 8 00:00:35,360 --> 00:00:32,189 extremum file why we need to focus on 9 00:00:39,350 --> 00:00:35,370 the hydrothermal system so I don't want 10 00:00:41,869 --> 00:00:39,360 to keep repeating it so um Luke Raja I 11 00:00:43,850 --> 00:00:41,879 want to ask in my research is I want to 12 00:00:46,639 --> 00:00:43,860 figure out the inter reaction the 13 00:00:48,229 --> 00:00:46,649 linkage between a microorganism and a 14 00:00:51,979 --> 00:00:48,239 geochemical cycle in the high 15 00:00:54,279 --> 00:00:51,989 temperature system so there are three 16 00:00:57,650 --> 00:00:54,289 different types of a hydrothermal system 17 00:00:59,389 --> 00:00:57,660 like the terrestrial hydrothermal system 18 00:01:01,729 --> 00:00:59,399 the most famous example is the 19 00:01:03,680 --> 00:01:01,739 Yellowstone National Park and the deep 20 00:01:07,270 --> 00:01:03,690 sea hydrothermal systems such as a black 21 00:01:10,219 --> 00:01:07,280 smoker or losses city both of them were 22 00:01:12,500 --> 00:01:10,229 investigated a lot like in previous talk 23 00:01:15,530 --> 00:01:12,510 and but I focus on the show sea 24 00:01:17,480 --> 00:01:15,540 hydrothermal system shows the 25 00:01:19,700 --> 00:01:17,490 hydrothermal system are geochemical and 26 00:01:22,280 --> 00:01:19,710 the physical transition between the 27 00:01:26,359 --> 00:01:22,290 other two systems it's more complicated 28 00:01:30,289 --> 00:01:26,369 than the other two and two systems and 29 00:01:33,109 --> 00:01:30,299 it's very interested but however not too 30 00:01:35,480 --> 00:01:33,119 much research come here so the show sea 31 00:01:40,700 --> 00:01:35,490 hydrothermal just like a golden my to 32 00:01:46,280 --> 00:01:40,710 open up so my someone inside located at 33 00:01:52,310 --> 00:01:46,290 the middle island greece it's on South 34 00:01:55,219 --> 00:01:52,320 agency sauce agency and lost iconic 35 00:01:58,670 --> 00:01:55,229 event it's 300 meter off shore of the 36 00:02:01,880 --> 00:01:58,680 paleo crow repair and the water taps is 37 00:02:04,429 --> 00:02:01,890 around 12 meters and this is a first 38 00:02:06,050 --> 00:02:04,439 difficulty I met right style this 39 00:02:09,290 --> 00:02:06,060 project because I don't know how to swim 40 00:02:12,480 --> 00:02:09,300 and we need to do scout school dive in 41 00:02:14,910 --> 00:02:12,490 to codex simple so my advisor 42 00:02:19,290 --> 00:02:14,920 young man's he helped me to collect all 43 00:02:22,500 --> 00:02:19,300 example in last summer so and that this 44 00:02:26,970 --> 00:02:22,510 is my symbol inside so the white men are 45 00:02:30,060 --> 00:02:26,980 covered on the vent so and the UM 2 46 00:02:32,310 --> 00:02:30,070 meter away from the AL Central vent 47 00:02:35,040 --> 00:02:32,320 there are some secrets cover on the 48 00:02:36,720 --> 00:02:35,050 sediment in the between a secret area 49 00:02:40,560 --> 00:02:36,730 and the white man area there's a 50 00:02:43,530 --> 00:02:40,570 transition zone so we collect the for 51 00:02:47,010 --> 00:02:43,540 sediment core is around 20 centimeters 52 00:02:49,800 --> 00:02:47,020 in four different place and applause the 53 00:02:52,770 --> 00:02:49,810 background oh area is like around 80 54 00:02:55,260 --> 00:02:52,780 meter away from this vent and we also 55 00:02:58,430 --> 00:02:55,270 collect some surface sediment poor fool 56 00:03:01,170 --> 00:02:58,440 is when he flew it and the barrel film 57 00:03:03,690 --> 00:03:01,180 so this is how we collected sediment the 58 00:03:08,130 --> 00:03:03,700 coal under a water and we bring this 59 00:03:10,170 --> 00:03:08,140 settlement co to import and user rhizome 60 00:03:12,360 --> 00:03:10,180 and the average 2 centimeter with 61 00:03:14,520 --> 00:03:12,370 drilling a hole and I put the rice on 62 00:03:18,030 --> 00:03:14,530 inside and they collect OLAP hole 63 00:03:20,610 --> 00:03:18,040 through it and a lost Pope really simple 64 00:03:25,170 --> 00:03:20,620 are we useful at your chemical data 65 00:03:29,900 --> 00:03:25,180 analysis and the low temperature and the 66 00:03:34,620 --> 00:03:29,910 ph I would were measured in the field so 67 00:03:40,110 --> 00:03:34,630 this is a transect of the simple inside 68 00:03:43,410 --> 00:03:40,120 leg here so this part did this is most 69 00:03:46,140 --> 00:03:43,420 close to Levin sauce so the temperature 70 00:03:49,260 --> 00:03:46,150 is around 80 degrees celsius and the 71 00:03:52,410 --> 00:03:49,270 decreased to 20 degrees sauces during 72 00:03:55,110 --> 00:03:52,420 like 20 centimeters times 2 meter scale 73 00:04:07,230 --> 00:03:55,120 and a pH increased from four to eight 74 00:04:09,840 --> 00:04:07,240 and so I first I predict if the venue 75 00:04:13,770 --> 00:04:09,850 food and icy water only mix to each 76 00:04:16,800 --> 00:04:13,780 other look um the profile the pattern 77 00:04:20,190 --> 00:04:16,810 gradient should be curry at with balls 78 00:04:23,340 --> 00:04:20,200 are the depths and the distance but when 79 00:04:25,820 --> 00:04:23,350 I take a look at my geochemical data so 80 00:04:28,369 --> 00:04:25,830 like the soffit megan is and 81 00:04:31,659 --> 00:04:28,379 total dissolved nitrogen the only 82 00:04:35,510 --> 00:04:31,669 function with the distance and the 83 00:04:38,809 --> 00:04:35,520 dissolved organic carbon create with the 84 00:04:42,909 --> 00:04:38,819 depth and I or arsenic they are more 85 00:04:46,089 --> 00:04:42,919 complicated so we I cannot see any very 86 00:04:51,140 --> 00:04:46,099 clear pattern associated with just 87 00:04:53,480 --> 00:04:51,150 distance or depth so it might be some 88 00:04:55,999 --> 00:04:53,490 other thing dry regulates that your 89 00:04:57,830 --> 00:04:56,009 chemical cycle here so microorganism 90 00:05:02,570 --> 00:04:57,840 will be the only answer in this 91 00:05:05,540 --> 00:05:02,580 environment so I choose a 16 sample and 92 00:05:08,809 --> 00:05:05,550 send forth Paris sequencing so it's 93 00:05:11,689 --> 00:05:08,819 included three our sample from each side 94 00:05:14,409 --> 00:05:11,699 medical from top middle and the button 95 00:05:17,360 --> 00:05:14,419 and the venting folate from my method 96 00:05:19,909 --> 00:05:17,370 porphyry foreign transition zone and the 97 00:05:25,510 --> 00:05:19,919 surface seawater and the fields uh 98 00:05:29,570 --> 00:05:25,520 negative control so this is a premier 99 00:05:41,390 --> 00:05:29,580 data I just got like around a month ago 100 00:05:45,079 --> 00:05:41,400 so in so um the i got like around 1.5 101 00:05:48,019 --> 00:05:45,089 million sequences and let's take root ah 102 00:05:50,920 --> 00:05:48,029 this colin so the four column is from 103 00:05:55,490 --> 00:05:50,930 four different as a diamond core and the 104 00:05:58,809 --> 00:05:55,500 secret and a big one call it looks very 105 00:06:03,649 --> 00:05:58,819 similar the microbial company just 106 00:06:06,409 --> 00:06:03,659 switch with the depth so that's don't in 107 00:06:14,089 --> 00:06:06,419 these three previous settlement co and 108 00:06:16,999 --> 00:06:14,099 tech roots the white mat first so the 109 00:06:19,399 --> 00:06:17,009 Tibbles the same hook is most close to 110 00:06:20,959 --> 00:06:19,409 event sauce it dominated with archaea 111 00:06:24,709 --> 00:06:20,969 it's like roughly seventy percent 112 00:06:27,920 --> 00:06:24,719 archaea in whole sample and it dominated 113 00:06:30,409 --> 00:06:27,930 with Thomason otro for some high 114 00:06:33,350 --> 00:06:30,419 personal file and it switched to a queef 115 00:06:35,809 --> 00:06:33,360 it k and because the laws are kiala 116 00:06:38,329 --> 00:06:35,819 produce a lot of hydrogen and the loss 117 00:06:38,850 --> 00:06:38,339 aquafit equivocal i can use hydrogen as 118 00:06:46,559 --> 00:06:38,860 the 119 00:06:50,490 --> 00:06:46,569 decreased jolla community switch to a 120 00:06:52,499 --> 00:06:50,500 casino bacteria from acute loss on metal 121 00:06:56,790 --> 00:06:52,509 file and the Lake Hanna depth in the 122 00:07:00,149 --> 00:06:56,800 Arctic and the exec availment and the 123 00:07:04,890 --> 00:07:00,159 next part is the let's take you the blue 124 00:07:07,950 --> 00:07:04,900 part is a proteobacteria mmm so the 125 00:07:13,040 --> 00:07:07,960 proteobacteria is dominating all the 126 00:07:15,869 --> 00:07:13,050 sample except for the vents temple and 127 00:07:19,950 --> 00:07:15,879 they dominate with the epsilon and the 128 00:07:23,519 --> 00:07:19,960 Delta and this is in the community 129 00:07:26,580 --> 00:07:23,529 switch they cause the regular sulfa 130 00:07:31,290 --> 00:07:26,590 cycle in this area so the episode our 131 00:07:33,570 --> 00:07:31,300 product bacterially Liam Famers sulfur 132 00:07:36,659 --> 00:07:33,580 oxides and the lake and Proteus sulfate 133 00:07:39,089 --> 00:07:36,669 and the Delta proteobacteria they use of 134 00:07:41,820 --> 00:07:39,099 it a lot they are very famous in Arabic 135 00:07:46,019 --> 00:07:41,830 so we're reducing bacteria so based on 136 00:07:52,290 --> 00:07:46,029 my own geochemical profile and my 137 00:07:54,680 --> 00:07:52,300 community profile ah close 12 and it's 138 00:07:57,719 --> 00:07:54,690 not only the Vengeance that good 139 00:08:00,360 --> 00:07:57,729 seawater it also the Delta 140 00:08:03,809 --> 00:08:00,370 proteobacteria late use sulfate and a 141 00:08:07,439 --> 00:08:03,819 produce sulfide in the inner transition 142 00:08:10,230 --> 00:08:07,449 zone loss of software oxidizer that 143 00:08:15,300 --> 00:08:10,240 produces a lot of sulfate and the late 144 00:08:17,820 --> 00:08:15,310 decrease in the sequence area again so 145 00:08:20,399 --> 00:08:17,830 let's switch to a heat map so from the 146 00:08:25,050 --> 00:08:20,409 him away can see all the simple dominate 147 00:08:27,290 --> 00:08:25,060 with the proteobacteria and only in 148 00:08:31,379 --> 00:08:27,300 awhile mate I switch to a different 149 00:08:34,259 --> 00:08:31,389 microbial community in the tip-sample is 150 00:08:36,810 --> 00:08:34,269 switched archaea and initial sample is 151 00:08:40,110 --> 00:08:36,820 switched to make us and action or 152 00:08:43,469 --> 00:08:40,120 bacteria so if we calculate the 153 00:08:47,699 --> 00:08:43,479 correlation coefficient of each violin 154 00:08:51,020 --> 00:08:47,709 we can see the ocular always prefer live 155 00:08:55,850 --> 00:08:51,030 with the other archaea but I 156 00:08:58,580 --> 00:08:55,860 the other on aerobic bacteria file and 157 00:09:02,480 --> 00:08:58,590 they always prefer to grow with the 158 00:09:06,200 --> 00:09:02,490 other aerobic bacteria the only 159 00:09:10,340 --> 00:09:06,210 exception is the Tamaki ohta so tomorrow 160 00:09:14,810 --> 00:09:10,350 Kelly prefer those are with the 161 00:09:17,120 --> 00:09:14,820 cyanobacteria from accuse and they 162 00:09:20,540 --> 00:09:17,130 always go together and the 163 00:09:24,860 --> 00:09:20,550 proteobacteria if they show up in the in 164 00:09:30,190 --> 00:09:24,870 a simple you cannot see any and archaea 165 00:09:33,620 --> 00:09:30,200 in a simple so I want to know how to 166 00:09:36,830 --> 00:09:33,630 hold a cluster analysis and this is a 167 00:09:39,020 --> 00:09:36,840 calculation result so the secrets in the 168 00:09:41,600 --> 00:09:39,030 background it always costs together and 169 00:09:43,640 --> 00:09:41,610 the transition zone and the wine met no 170 00:09:46,660 --> 00:09:43,650 matter I user or community or the 171 00:09:54,860 --> 00:09:46,670 bacterial community to calculate it and 172 00:09:59,540 --> 00:09:54,870 the next part I use a so track to so to 173 00:10:02,660 --> 00:09:59,550 check the microorganism how to mix with 174 00:10:05,270 --> 00:10:02,670 seawater and the venue fluid so I set up 175 00:10:07,580 --> 00:10:05,280 a three different sources so like 176 00:10:10,930 --> 00:10:07,590 seawater penguin statements and the 177 00:10:14,750 --> 00:10:10,940 venting sediment so based on this result 178 00:10:17,590 --> 00:10:14,760 regular white net area they dominated 179 00:10:21,080 --> 00:10:17,600 with definitely dominate with the vent 180 00:10:24,680 --> 00:10:21,090 sediment microbial community but the 181 00:10:26,240 --> 00:10:24,690 backgrounds and the secrets determinate 182 00:10:28,610 --> 00:10:26,250 with the sediment of the ground 183 00:10:30,920 --> 00:10:28,620 settlement microbial community but in a 184 00:10:34,700 --> 00:10:30,930 transition zone that all mix with 185 00:10:38,810 --> 00:10:34,710 seawater trans a background settlement 186 00:10:42,260 --> 00:10:38,820 and the venting sediment so the 187 00:10:46,520 --> 00:10:42,270 microbial community it just makes from 188 00:10:49,130 --> 00:10:46,530 the sea water and the van andel event so 189 00:10:51,710 --> 00:10:49,140 they mix with each other and the left 190 00:10:57,530 --> 00:10:51,720 some unknown and this is the next step I 191 00:11:00,830 --> 00:10:57,540 I need to figure out in so the roughly 192 00:11:03,940 --> 00:11:00,840 summary of my research the geochemistry 193 00:11:05,890 --> 00:11:03,950 is controlled by microbial community 194 00:11:08,500 --> 00:11:05,900 even though microbial come here just mix 195 00:11:11,020 --> 00:11:08,510 with water and the venting fluid but 196 00:11:15,160 --> 00:11:11,030 because of microbial community they have 197 00:11:18,340 --> 00:11:15,170 a different metabolisms in here late so 198 00:11:20,590 --> 00:11:18,350 they regulate the geochemical cycle in 199 00:11:23,170 --> 00:11:20,600 this system it's become so different 200 00:11:31,350 --> 00:11:23,180 it's not only just associated with depth 201 00:11:34,720 --> 00:11:31,360 and distance so um next step I need to 202 00:11:39,190 --> 00:11:34,730 finish a qualify of the function gene to 203 00:11:42,180 --> 00:11:39,200 figure out how much a what kind of my 204 00:11:45,580 --> 00:11:42,190 table isn't located in each side and 205 00:11:47,950 --> 00:11:45,590 around a prayer crust and to predict the 206 00:11:50,410 --> 00:11:47,960 functional profile of a microbial 207 00:11:53,800 --> 00:11:50,420 community with ste this turns depth 208 00:11:57,490 --> 00:11:53,810 temperature pH or even each different on 209 00:12:01,000 --> 00:11:57,500 your chemical profile and i will run 210 00:12:04,420 --> 00:12:01,010 some metagenomics analysis I just my 211 00:12:08,350 --> 00:12:04,430 proposal just got um proved by the 212 00:12:10,960 --> 00:12:08,360 carbon observatory and the fondant i can 213 00:12:14,140 --> 00:12:10,970 send the meta-genome make sequencing for 214 00:12:18,790 --> 00:12:14,150 them and the future work i will come by 215 00:12:20,470 --> 00:12:18,800 a previous data i already finished like 216 00:12:23,710 --> 00:12:20,480 the cultural and a thermodynamic 217 00:12:27,790 --> 00:12:23,720 calculation and hope i can contract the 218 00:12:32,620 --> 00:12:27,800 whole biogeochemical cycle model in this 219 00:12:36,580 --> 00:12:32,630 and show a hydrothermal systems and a 220 00:12:47,070 --> 00:12:36,590 new thing for my advisory and all the 221 00:12:47,080 --> 00:12:53,430 okay we have time for a few questions 222 00:12:58,180 --> 00:12:55,780 yeah thank you that was a fantastic talk 223 00:12:59,650 --> 00:12:58,190 and it sounds like really fun work I'm 224 00:13:02,110 --> 00:12:59,660 curious if you think the reason that 225 00:13:05,140 --> 00:13:02,120 you're not seeing archaea in the samples 226 00:13:06,490 --> 00:13:05,150 with proteobacteria is solely spatially 227 00:13:07,750 --> 00:13:06,500 related so that you're just not 228 00:13:09,280 --> 00:13:07,760 collecting samples with our key in them 229 00:13:11,320 --> 00:13:09,290 because they're not in that part of the 230 00:13:13,090 --> 00:13:11,330 water column or if there is an out 231 00:13:15,520 --> 00:13:13,100 competition of some form that having pro 232 00:13:16,900 --> 00:13:15,530 do is in your sample automatically means 233 00:13:18,600 --> 00:13:16,910 that they're doing something that the 234 00:13:30,530 --> 00:13:18,610 archaea then can't survive in that area 235 00:13:38,040 --> 00:13:34,760 so actually they still have a like 236 00:13:41,010 --> 00:13:38,050 little bit archaea in the other color 237 00:13:43,800 --> 00:13:41,020 just not too much because the 238 00:13:47,040 --> 00:13:43,810 temperature is much lower than event so 239 00:13:49,050 --> 00:13:47,050 i think the most of our Kia survive here 240 00:13:53,070 --> 00:13:49,060 they need a high temperature and the low 241 00:13:56,300 --> 00:13:53,080 pH a violent so okay that's why less we 242 00:14:03,480 --> 00:13:56,310 should a community okay thanks very much